Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Nicotiana tabacum

CDS Sequence

CDS ID	lcl\|NW_015898783.1_cds_XP_016448768.1_43389
CDS Infomation	[gene=LOC107773856] [db_xref=GeneID:107773856] [protein=probable rhamnogalacturonate lyase B] [protein_id=XP_016448768.1] [location=complement(join(422..575,748..864,1057..1216,1375..1516,1609..1693,1967..2073,2185..2343,2431..2601,2966..3101,3211..3330,3437..3553,3642..3692,3779..3900,3990..4108,4767..4794))] [gbkey=CDS]
Sequence	ATGCCACATAAAACTGGAATGGAGGGAGTTGATAGCAAATGTCATCTTTATGCAAATTTT CGTGCTGACTTGATATTTATTTTGTCTAAAAACAGGCGAAGATTGACAACAACGACAGCC GTCAAATTGGACATACAAACTGAACAAGTGACACTGAGCAATGGTATCGCCAATGTTACT TTGTCAATACCAGATGGTCTCGTCACGAACATATCATATGGTGGAATTGACAACTTACTT GCGACCCAAAATGTCAAAAATGATAGAGGGTATTGGGATGTTTTCTGGAATCAGACAGCA TCTCGAAGAGTTCGAAAAAAGTTCTTAGGAACAAGTTTCGAGGTCATAATGGACAGTGAA AACCAGGCAGAAATTTCTTTTAAAAATACATGGAATGCTTCTGAATCTGATGAACTTCCG TTAAACTTTGACATAAGGTTTGTGATGCTGCGAGACACACCCGGATTTTATACTTACGCT ATATTTGAACGTTTAGAAGGATGGCCCCTTGTCTACATCGAAAATCTAAGGATTGTCTTC AAGCTTCAACAAGACATGTTTCATTACATGGCTATCTCGGATGAGAGGCAGAGGGTCATG CCAATGCCGGTGGATCGAGAGACGGGCGAGGTGCTTGACTACAAAGAAGCTGTTCTTTTG ACAAATCCAACTAATCCAGATCTAAAAGGAGAGGTGGATGACAAATATTTCTATGTAAAT GATAACAAAGACGATAGAGTTCATGGGTGGGTAGGTGCTAATCCTCCTGTAGGGTTTTGG ATGATAATTCCGAGTGATGAGTTTCGTACCGGAGGACCTTACAAACAAGATCTCACTTCA CATGTTGGTCCAACTGTACTTTCTGTATTTGTAAGTAGACATTATGCCGGAGAAGATCTG GTAATCAAATTTCAACAAGGAGAGCCTTGGAAAAAAGTTATTGGCCCTGTATGCCTGTAT CTCAACTCAGATGCTTCAGCTAAGGACAGTCCATCCATGCTTTGGGATGATGCAAAGAAA AGGATTAATCAAGAAGTCACAAGCTGGCCCTATGATTTTCCAGTTTCAACTGACTACATC AAATCTAATCAAAGAGGAGCAGTTAGAGGTCAACTTTTCGTTAATGACAGCACTACTACT TTAATATCAGCATCCAACGCTTCTGTAGGGTTAGCACCACCAGGAGATTCTGGATCTTGG CAAAGAGAAAACAAAGGATATCAGTTTTGGATTAAAGCAGATGCTAGTGGGAATTTTTCC ATAGAAAATGTCATATCTGGTACATATAACTTGTATGCAACCGTCCCGGGAATTATTGGG GATTACAAATACACTTCTGATGTACAAGTTACTCCAGGTTCTAGTATTGAATTAGGGAGT TTGGTTTATAATCCTCCACGAAATGGAGTCACACTTTGGGAAATCGGTGTGCCAGATCGC ACAGCTGCTGAATTCTTCGTACCAATTCCACCCCCACAATTTAAAGTTCACGTATACCAA AACAATTCTGAATCAATATTTAGACAGTATGGTTTGTGGGAACAATATAGTGCTTTATAT CCTGACAATGATCTCATCTACAATGTTGGGACTAACAATTATTCAACAGACTGGTTTTTT GCTCATGTTACAAGGAATATAGGAAATAACACGTATAATGCTACTACATGGAGAATTATA TTTAGCCTTGAAAGTGTTGACAATACGTCGAATTACACTCTCCAATTGGCTCTTGCAGCA GCTCAGAGAGCTGAACTACAAGTATGTAGCTTATCCTTGATTCCTTGA

Peptide Sequence

PEP ID	XP_016448768.1
PEP Infomation	PREDICTED: probable rhamnogalacturonate lyase B [Nicotiana tabacum]
Sequence	MPHKTGMEGVDSKCHLYANFRADLIFILSKNRRRLTTTTAVKLDIQTEQVTLSNGIANVT LSIPDGLVTNISYGGIDNLLATQNVKNDRGYWDVFWNQTASRRVRKKFLGTSFEVIMDSE NQAEISFKNTWNASESDELPLNFDIRFVMLRDTPGFYTYAIFERLEGWPLVYIENLRIVF KLQQDMFHYMAISDERQRVMPMPVDRETGEVLDYKEAVLLTNPTNPDLKGEVDDKYFYVN DNKDDRVHGWVGANPPVGFWMIIPSDEFRTGGPYKQDLTSHVGPTVLSVFVSRHYAGEDL VIKFQQGEPWKKVIGPVCLYLNSDASAKDSPSMLWDDAKKRINQEVTSWPYDFPVSTDYI KSNQRGAVRGQLFVNDSTTTLISASNASVGLAPPGDSGSWQRENKGYQFWIKADASGNFS IENVISGTYNLYATVPGIIGDYKYTSDVQVTPGSSIELGSLVYNPPRNGVTLWEIGVPDR TAAEFFVPIPPPQFKVHVYQNNSESIFRQYGLWEQYSALYPDNDLIYNVGTNNYSTDWFF AHVTRNIGNNTYNATTWRIIFSLESVDNTSNYTLQLALAAAQRAELQVCSLSLIP

Transcript Sequence

Gene sequence data has not been registered.